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Cofit
Protein
Homologs
Top cofit genes for GFF4595 from
Variovorax sp. SCN45
Transcriptional regulator
SEED: Transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4499
Uncharacterized DUF1427 protein PA2697
no
0.64
2
GFF269
2-methylaconitate isomerase
no
0.64
3
GFF272
thioesterase superfamily protein
no
0.64
4
GFF521
Secretion protein HlyD precursor
no
0.63
5
GFF4592
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
0.47
0.63
6
GFF2543
Uncharacterized membrane protein Bcep18194_A6058
0.48
0.61
7
GFF6273
Nicotinamide-nucleotide amidase (EC 3.5.1.42)
0.30
0.61
8
GFF4174
FIG00919961: hypothetical protein
no
0.61
9
GFF569
Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)
no
0.61
10
GFF4639
Glucose-1-phosphate cytidylyltransferase (EC 2.7.7.33)
no
0.60
11
GFF268
Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)
0.88
0.60
12
GFF4779
Broad-specificity amino acid ABC transporter, permease protein 2
no
0.60
13
GFF3609
ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.59
14
GFF7381
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
0.85
0.59
15
GFF2719
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.59
16
GFF2818
Phosphoenolpyruvate synthase (EC 2.7.9.2)
0.32
0.59
17
GFF2961
CzcABC family efflux RND transporter, transmembrane protein
no
0.59
18
GFF5548
Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains
no
0.59
19
GFF270
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117)
0.38
0.58
20
GFF7377
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
no
0.58
Or look for
negative cofitness