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  • Top cofit genes for PS417_23510 from Pseudomonas simiae WCS417

    HopJ type III effector protein
    SEED: Type III effector HopPmaJ

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12395 aminopeptidase N no 0.21
    2 PS417_15190 acyl-CoA dehydrogenase 0.26 0.21
    3 PS417_11660 acylamide amidohydrolase no 0.21
    4 PS417_27275 hypothetical protein no 0.20
    5 PS417_02280 GlcNAc-PI de-N-acetylase no 0.20
    6 PS417_07290 aldehyde dehydrogenase no 0.19
    7 PS417_07860 hypothetical protein no 0.18
    8 PS417_24905 DNA-binding protein no 0.18
    9 PS417_04580 hypothetical protein no 0.18
    10 PS417_20090 DegT/DnrJ/EryC1/StrS aminotransferase no 0.17
    11 PS417_15010 TetR family transcriptional regulator no 0.17
    12 PS417_17240 trigger factor no 0.17
    13 PS417_15250 DNA repair protein no 0.17
    14 PS417_05680 DNA mismatch repair protein MutS no 0.17
    15 PS417_15150 hypothetical protein no 0.17
    16 PS417_20695 alpha/beta hydrolase 0.42 0.17
    17 PS417_08105 N-ethylammeline chlorohydrolase no 0.17
    18 PS417_13605 short-chain dehydrogenase no 0.17
    19 PS417_09660 lysine transporter LysE no 0.17
    20 PS417_11500 hypothetical protein no 0.16

    Or look for negative cofitness