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  • Top cofit genes for GFF459 from Variovorax sp. SCN45

    Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily / DUF3471 domain
    SEED: Beta-lactamase (EC 3.5.2.6)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4904 hypothetical protein no 0.56
    2 GFF4433 1,6-anhydro-N-acetylmuramyl-L-alanine amidase no 0.51
    3 GFF1351 Acyl-CoA dehydrogenase no 0.51
    4 GFF4147 hypothetical protein no 0.50
    5 GFF5444 FIG005080: Possible exported protein no 0.49
    6 GFF1763 HemK family modification methylase PA2179 no 0.48
    7 GFF2251 no description no 0.45
    8 GFF3696 mRNA 3-end processing factor no 0.45
    9 GFF5847 putative membrane protein no 0.45
    10 GFF7299 MotA/TolQ/ExbB proton channel family protein no 0.45
    11 GFF6754 no description no 0.45
    12 GFF3350 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.44
    13 GFF7107 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.44
    14 GFF6243 Ku domain protein no 0.44
    15 GFF1420 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) no 0.44
    16 GFF207 Death on curing protein, Doc toxin no 0.43
    17 GFF1144 hypothetical protein no 0.43
    18 GFF4743 Aspartate aminotransferase (EC 2.6.1.1) no 0.43
    19 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.42
    20 GFF5495 Putative transmembrane protein no 0.42

    Or look for negative cofitness