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  • Top cofit genes for GFF4582 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, small permease component
    SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4993 putative tetratricopeptide repeat family protein no 0.62
    2 GFF4644 no description no 0.57
    3 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.57
    4 GFF5270 BUG/TctC family periplasmic protein no 0.56
    5 GFF6160 Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family no 0.55
    6 GFF7322 hypothetical protein no 0.54
    7 GFF4423 Conjugative transfer protein TrbI no 0.54
    8 GFF6104 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.54
    9 GFF6352 T6SS component TssM (IcmF/VasK) no 0.53
    10 GFF5999 DNA polymerase IV (EC 2.7.7.7) no 0.52
    11 GFF2645 Acyl dehydratase no 0.50
    12 GFF5994 Chlorogenate esterase no 0.50
    13 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.50
    14 GFF6120 Exonuclease SbcC no 0.50
    15 GFF1210 D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-) no 0.50
    16 GFF6841 hypothetical protein no 0.49
    17 GFF5836 no description no 0.49
    18 GFF3740 Transcriptional regulator, MerR family no 0.48
    19 GFF2683 Protein containing domains DUF404, DUF407 no 0.48
    20 GFF4396 Mobile element protein no 0.48

    Or look for negative cofitness