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  • Top cofit genes for PS417_23445 from Pseudomonas simiae WCS417

    aldolase
    SEED: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01710 histidine utilization repressor 0.53 0.38
    2 PS417_27010 threonine dehydratase 0.47 0.33
    3 PS417_01565 imidazole glycerol phosphate synthase no 0.32
    4 PS417_04415 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) no 0.31
    5 PS417_26740 homoserine acetyltransferase 0.50 0.31
    6 PS417_01575 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) no 0.31
    7 PS417_04420 histidinol dehydrogenase no 0.30
    8 PS417_26745 methionine biosynthesis protein MetW 0.54 0.30
    9 PS417_24835 hypothetical protein 0.28 0.30
    10 PS417_21125 phosphoadenosine phosphosulfate reductase no 0.30
    11 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase no 0.30
    12 PS417_18585 3-isopropylmalate dehydrogenase no 0.30
    13 PS417_25720 anthranilate synthase component II no 0.29
    14 PS417_23800 ketol-acid reductoisomerase no 0.29
    15 PS417_08195 hypothetical protein no 0.29
    16 PS417_26995 phosphoserine phosphatase no 0.29
    17 PS417_18595 3-isopropylmalate dehydratase no 0.29
    18 PS417_18600 isopropylmalate isomerase no 0.28
    19 PS417_23805 acetolactate synthase 3 regulatory subunit no 0.28
    20 PS417_08230 lipopolysaccharide biosynthesis protein RfbH no 0.28

    Or look for negative cofitness