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  • Top cofit genes for PS417_02340 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR family transcriptional regulator PA4989

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11280 HxcX atypical pseudopilin no 0.22
    2 PS417_03430 methyltransferase type 11 no 0.21
    3 PS417_11945 hypothetical protein no 0.20
    4 PS417_04770 LysR family transcriptional regulator no 0.19
    5 PS417_07150 permase 0.11 0.19
    6 PS417_20825 drug:proton antiporter no 0.19
    7 PS417_17630 RNA polymerase sigma factor no 0.19
    8 PS417_17140 LysR family transcriptional regulator 0.27 0.19
    9 PS417_05650 leucyl-tRNA synthetase no 0.19
    10 PS417_01180 ribosomal protein S6 modification protein 0.30 0.19
    11 PS417_05560 ABC transporter no 0.18
    12 PS417_02035 3-ketoacyl-ACP reductase no 0.18
    13 PS417_14575 MFS transporter no 0.18
    14 PS417_14215 diguanylate cyclase no 0.18
    15 PS417_11365 membrane protein no 0.18
    16 PS417_25965 acyl-CoA dehydrogenase 0.22 0.17
    17 PS417_15635 hypothetical protein 0.18 0.17
    18 PS417_07955 malate:quinone oxidoreductase 0.23 0.17
    19 PS417_05710 hypothetical protein 0.36 0.17
    20 PS417_14485 malto-oligosyltrehalose trehalohydrolase no 0.17

    Or look for negative cofitness