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  • Top cofit genes for PS417_23415 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    KEGG: AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17510 histidine kinase no 0.46
    2 PS417_17515 GfdT protein 0.32 0.41
    3 PS417_04995 glutathione S-transferase no 0.37
    4 PS417_12610 RNA polymerase sigma factor 0.25 0.36
    5 PS417_20955 secretion protein no 0.35
    6 PS417_06365 RNA polymerase sigma factor no 0.35
    7 PS417_21040 sulfurylase 0.67 0.34
    8 PS417_21045 cysteine synthase no 0.33
    9 PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) no 0.33
    10 PS417_06635 ferredoxin no 0.32
    11 PS417_11170 aldehyde dehydrogenase no 0.31
    12 PS417_09690 sugar dehydrogenase no 0.31
    13 PS417_05035 hypothetical protein no 0.31
    14 PS417_10925 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) 0.38 0.30
    15 PS417_15570 excinuclease ABC subunit A 0.78 0.30
    16 PS417_11895 Inositol transport system permease protein (from data) no 0.29
    17 PS417_16070 TonB-dependent receptor no 0.29
    18 PS417_12530 LysR family transcriptional regulator no 0.29
    19 PS417_11875 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) no 0.27
    20 PS417_27475 membrane protein no 0.27

    Or look for negative cofitness