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  • Top cofit genes for GFF4570 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Probable collagenase (EC 3.4.24.3)
    SEED: Probable collagenase (EC 3.4.24.3)
    KEGG: putative protease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4097 FIG00761799: membrane protein no 0.48
    2 GFF1457 Flagellar biosynthesis protein FliL no 0.46
    3 GFF1992 Transcriptional regulator, TetR family no 0.46
    4 GFF4950 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.45
    5 GFF4383 Mlr6156 protein no 0.45
    6 GFF1573 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) no 0.42
    7 GFF2710 Transcriptional regulator, LysR family no 0.41
    8 GFF3486 hypothetical protein no 0.41
    9 GFF4542 FIG002337: predicted inner membrane protein no 0.41
    10 GFF4577 Bacterial luciferase family protein 0.39 0.40
    11 GFF5437 Periplasmic molybdate-binding domain no 0.40
    12 GFF3139 IncF plasmid conjugative transfer pilus assembly protein TraU no 0.39
    13 GFF5785 Mobile element protein no 0.39
    14 GFF1458 Flagellar motor switch protein FliM no 0.39
    15 GFF885 Naphthoate synthase (EC 4.1.3.36) no 0.39
    16 GFF5337 Phage integrase no 0.39
    17 GFF2472 TonB-dependent hemin , ferrichrome receptor no 0.38
    18 GFF2784 Sensor histidine kinase no 0.38
    19 GFF1075 tRNA-Arg-CCT no 0.38
    20 GFF611 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) no 0.37

    Or look for negative cofitness