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  • Top cofit genes for GFF4570 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Probable collagenase (EC 3.4.24.3)
    SEED: Probable collagenase (EC 3.4.24.3)
    KEGG: putative protease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5785 Mobile element protein no 0.48
    2 GFF4383 Mlr6156 protein no 0.45
    3 GFF169 Outer membrane protein romA no 0.45
    4 GFF3188 hypothetical protein no 0.42
    5 GFF3980 Vitamin B12 ABC transporter, B12-binding component BtuF 0.31 0.41
    6 GFF5410 Bll5684 protein no 0.41
    7 GFF2815 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) no 0.40
    8 GFF4319 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.40
    9 GFF2558 hypothetical protein no 0.40
    10 GFF2536 two-component hybrid sensor and regulator no 0.40
    11 GFF277 hypothetical protein no 0.40
    12 GFF3479 Type IV secretory pathway, VirD2 components (relaxase) no 0.40
    13 GFF5769 hypothetical protein no 0.39
    14 GFF2005 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.46 0.39
    15 GFF4976 Maebl no 0.38
    16 GFF1103 Outer membrane protein (porin) no 0.38
    17 GFF3149 IncF plasmid conjugative transfer pilus assembly protein TraE no 0.38
    18 GFF5770 putative N-acetylglucosaminyltransferase no 0.38
    19 GFF2792 Predicted transcriptional regulator no 0.38
    20 GFF2333 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) no 0.37

    Or look for negative cofitness