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  • Top cofit genes for GFF4567 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7337 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.62
    2 GFF421 hypothetical protein no 0.58
    3 GFF5838 Probable signal peptide protein precursor no 0.57
    4 GFF2738 hypothetical protein no 0.56
    5 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) no 0.54
    6 GFF80 no description no 0.54
    7 GFF2830 Uncharacterized protein CC_3061 no 0.52
    8 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) no 0.52
    9 GFF326 Polysaccharide deacetylase, caspase activity no 0.51
    10 GFF5687 FIG01027591: hypothetical protein no 0.51
    11 GFF5902 probable membrane protein STY1534 no 0.50
    12 GFF4372 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.50
    13 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B 0.29 0.50
    14 GFF5435 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), plant type no 0.50
    15 GFF4647 no description no 0.49
    16 GFF1300 hypothetical protein no 0.48
    17 GFF1355 Transcriptional regulator, LysR family no 0.48
    18 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) 0.29 0.48
    19 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.48
    20 GFF4397 hypothetical protein no 0.48

    Or look for negative cofitness