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Cofit
Protein
Homologs
Top cofit genes for GFF4565 from
Variovorax sp. SCN45
GGDEF domain protein
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1025
Chromate transport protein ChrA
no
0.56
2
GFF1030
Ferredoxin reductase
no
0.56
3
GFF6164
FIG01094124: hypothetical protein
no
0.55
4
GFF5260
Uncharacterized protein ygiD
no
0.55
5
GFF157
Methyltransferase type 12
no
0.54
6
GFF1655
no description
0.39
0.53
7
GFF5407
Membrane protein TerC, possibly involved in tellurium resistance
no
0.52
8
GFF5003
FIG00348156: hypothetical protein
no
0.51
9
GFF4060
hypothetical protein
no
0.51
10
GFF515
ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.51
11
GFF2437
hypothetical protein
no
0.50
12
GFF1401
Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
no
0.49
13
GFF6657
Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system
no
0.49
14
GFF6820
hypothetical protein
no
0.48
15
GFF178
Mannonate dehydratase (EC 4.2.1.8)
no
0.48
16
GFF6963
Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1)
no
0.48
17
GFF6015
Transcriptional regulator PA0877, LysR family
no
0.48
18
GFF1178
hypothetical protein
no
0.48
19
GFF1017
conserved hypothetical protein-transmembrane prediction
no
0.48
20
GFF3526
hypothetical protein
no
0.48
Or look for
negative cofitness