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  • Top cofit genes for GFF4563 from Variovorax sp. SCN45

    Ferredoxin, 2Fe-2S
    SEED: Ferredoxin, 2Fe-2S

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF959 Phage holin no 0.55
    2 GFF6816 SAM-dependent methyltransferase no 0.54
    3 GFF3048 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) no 0.51
    4 GFF7389 Cyclohexanone monooxygenase (EC 1.14.13.22) no 0.50
    5 GFF801 Murein hydrolase activator NlpD no 0.50
    6 GFF4868 Type IV secretory pathway, VirD2 components (relaxase) no 0.50
    7 GFF5377 Transcriptional regulator, AcrR family no 0.49
    8 GFF2070 D-aminoacyl-tRNA deacylase (EC 3.1.1.96) no 0.49
    9 GFF4143 Dihydrofolate reductase (EC 1.5.1.3) no 0.48
    10 GFF4511 Transcriptional regulator, LysR family no 0.47
    11 GFF6573 Conjugative transfer protein TrbF no 0.46
    12 GFF256 Twitching motility protein PilT no 0.45
    13 GFF4207 hypothetical protein no 0.45
    14 GFF2244 hypothetical protein no 0.45
    15 GFF838 hypothetical protein no 0.45
    16 GFF3777 Prolyl endopeptidase (EC 3.4.21.26) no 0.45
    17 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.45
    18 GFF3363 BUG/TctC family periplasmic protein no 0.44
    19 GFF4705 Monooxygenase, flavin-binding family no 0.44
    20 GFF1310 hypothetical protein no 0.44

    Or look for negative cofitness