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Cofit
Protein
Homologs
Top cofit genes for GFF4563 from
Variovorax sp. SCN45
Ferredoxin, 2Fe-2S
SEED: Ferredoxin, 2Fe-2S
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF959
Phage holin
no
0.55
2
GFF6816
SAM-dependent methyltransferase
no
0.54
3
GFF3048
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
no
0.51
4
GFF7389
Cyclohexanone monooxygenase (EC 1.14.13.22)
no
0.50
5
GFF801
Murein hydrolase activator NlpD
no
0.50
6
GFF4868
Type IV secretory pathway, VirD2 components (relaxase)
no
0.50
7
GFF5377
Transcriptional regulator, AcrR family
no
0.49
8
GFF2070
D-aminoacyl-tRNA deacylase (EC 3.1.1.96)
no
0.49
9
GFF4143
Dihydrofolate reductase (EC 1.5.1.3)
no
0.48
10
GFF4511
Transcriptional regulator, LysR family
no
0.47
11
GFF6573
Conjugative transfer protein TrbF
no
0.46
12
GFF256
Twitching motility protein PilT
no
0.45
13
GFF4207
hypothetical protein
no
0.45
14
GFF2244
hypothetical protein
no
0.45
15
GFF838
hypothetical protein
no
0.45
16
GFF3777
Prolyl endopeptidase (EC 3.4.21.26)
no
0.45
17
GFF4926
Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23)
no
0.45
18
GFF3363
BUG/TctC family periplasmic protein
no
0.44
19
GFF4705
Monooxygenase, flavin-binding family
no
0.44
20
GFF1310
hypothetical protein
no
0.44
Or look for
negative cofitness