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  • Top cofit genes for GFF4561 from Variovorax sp. SCN45

    Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27)
    SEED: Domain often clustered or fused with uracil-DNA glycosylase
    KEGG: DNA polymerase bacteriophage-type

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5184 no description no 0.58
    2 GFF7328 no description no 0.56
    3 GFF4653 Cytochrome c peroxidase (EC 1.11.1.5) no 0.55
    4 GFF7319 hypothetical protein no 0.54
    5 GFF1237 Methionine sulfoxide reductase cytochrome b subunit no 0.53
    6 GFF4304 Cyclohexanecarboxylate--CoA ligase 0.81 0.52
    7 GFF2113 NADH dehydrogenase (EC 1.6.99.3) no 0.52
    8 GFF169 Protein-glutamate methylesterase (EC 3.1.1.61) no 0.52
    9 GFF1583 Fumarate hydratase class I, beta region (EC 4.2.1.2); L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32) no 0.51
    10 GFF3120 no description no 0.51
    11 GFF906 Transcriptional regulator no 0.50
    12 GFF7277 Mobile element protein 0.20 0.50
    13 GFF1988 Serine/threonine protein kinase no 0.50
    14 GFF2913 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.50
    15 GFF3388 Transcriptional regulator, AcrR family no 0.50
    16 GFF730 Class A beta-lactamase (EC 3.5.2.6) no 0.50
    17 GFF7253 Mobile element protein no 0.49
    18 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.49
    19 GFF1682 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.49
    20 GFF2771 BUG/TctC family periplasmic protein 0.29 0.49

    Or look for negative cofitness