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  • Top cofit genes for PS417_23340 from Pseudomonas simiae WCS417

    diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04860 ATPase no 0.22
    2 PS417_24810 aldehyde dehydrogenase 0.25 0.21
    3 PS417_03435 cytochrome P450 no 0.21
    4 PS417_22515 2-dehydropantoate 2-reductase no 0.21
    5 PS417_26950 LysR family transcriptional regulator no 0.19
    6 PS417_20395 hypothetical protein no 0.19
    7 PS417_09715 hypothetical protein 0.52 0.18
    8 PS417_20465 hypothetical protein no 0.18
    9 PS417_16065 3-phytase no 0.18
    10 PS417_19930 DNA methyltransferase no 0.17
    11 PS417_24550 ATP-dependent helicase no 0.17
    12 PS417_20440 integrase no 0.17
    13 PS417_03185 NADPH:quinone reductase 0.25 0.17
    14 PS417_00215 peroxiredoxin OsmC no 0.17
    15 PS417_27035 FAD-linked oxidase no 0.17
    16 PS417_20420 reverse transcriptase no 0.17
    17 PS417_13730 hypothetical protein no 0.16
    18 PS417_01710 histidine utilization repressor no 0.16
    19 PS417_17825 AraC family transcriptional regulator no 0.16
    20 PS417_14885 dienelactone hydrolase 0.48 0.16

    Or look for negative cofitness