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Cofit
Protein
Homologs
Top cofit genes for GFF4558 from
Variovorax sp. SCN45
RNA polymerase ECF-type sigma factor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF864
no description
no
0.57
2
GFF685
Tricarboxylate transport protein TctC
no
0.54
3
GFF7139
MATE efflux family protein
no
0.54
4
GFF6094
1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149)
no
0.53
5
GFF2086
hypothetical protein
no
0.51
6
GFF3085
no description
no
0.51
7
GFF794
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.49
8
GFF3468
Nucleoside-diphosphate-sugar epimerases
no
0.49
9
GFF5814
Rhodanese-related sulfurtransferase
no
0.49
10
GFF6684
ABC transporter, ATP-binding protein
no
0.48
11
GFF4018
Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family
0.31
0.48
12
GFF2551
Endonuclease/exonuclease/phosphatase
no
0.47
13
GFF866
no description
no
0.47
14
GFF2432
Fe2+-dicitrate sensor, membrane component
no
0.47
15
GFF6841
hypothetical protein
no
0.46
16
GFF3720
Alternative dihydrofolate reductase 3
no
0.46
17
GFF6186
no description
no
0.46
18
GFF1821
D-glycerate 2-kinase (EC 2.7.1.165)
0.25
0.46
19
GFF5432
Glutathione S-transferase family protein
no
0.46
20
GFF4632
Glycosyl transferase, family 2
no
0.46
Or look for
negative cofitness