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  • Top cofit genes for GFF4548 from Variovorax sp. SCN45

    Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12)
    SEED: Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12)
    KEGG: peptide-methionine (R)-S-oxide reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5107 Transcriptional regulator, LysR family no 0.60
    2 GFF3023 C4-dicarboxylate transport protein no 0.58
    3 GFF7287 Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) no 0.57
    4 GFF6244 Predicted deacylase no 0.56
    5 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) no 0.55
    6 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA no 0.55
    7 GFF3490 Putative amidase R03093 no 0.54
    8 GFF1873 KEGG: LacI family transcriptional regulator no 0.53
    9 GFF3722 FIG00931152: hypothetical protein no 0.53
    10 GFF6519 Molybdenum cofactor cytidylyltransferase (EC 2.7.7.76) no 0.52
    11 GFF5049 NAD-dependent protein deacetylase of SIR2 family no 0.52
    12 GFF2520 UPF0053 inner membrane protein YtfL no 0.52
    13 GFF118 putative membrane protein no 0.52
    14 GFF2582 Uncharacterized DUF3460-containg protein Bmul_0854 no 0.51
    15 GFF1856 FIG00636408: hypothetical protein no 0.51
    16 GFF3174 Oxidoreductase, GMC family no 0.51
    17 GFF1224 Transcriptional regulator, LysR family no 0.50
    18 GFF642 Membrane protease family protein BA0301 no 0.50
    19 GFF6937 Membrane protein no 0.50
    20 GFF6425 no description no 0.50

    Or look for negative cofitness