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  • Top cofit genes for GFF4546 from Variovorax sp. SCN45

    Permease of the drug/metabolite transporter (DMT) superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5502 Transcriptional regulator, LysR family no 0.54
    2 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.53
    3 GFF5648 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) 0.62 0.52
    4 GFF6819 hypothetical protein no 0.52
    5 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family no 0.51
    6 GFF2469 hypothetical protein no 0.51
    7 GFF6778 possible endonuclease/exonuclease/phosphatase family protein no 0.51
    8 GFF4842 Conjugative transfer protein TrbG no 0.50
    9 GFF3074 Putative polysaccharide deacetylase 0.37 0.50
    10 GFF803 MutT/Nudix family protein 0.36 0.50
    11 GFF911 KEGG: transcriptional regulator no 0.49
    12 GFF3830 Uncharacterized MFS-type transporter no 0.49
    13 GFF3182 Cyclopropane-fatty-acyl-phospholipid synthase-like protein, clusters with FIG005069 no 0.49
    14 GFF3334 hypothetical protein no 0.49
    15 GFF4136 hypothetical protein no 0.49
    16 GFF1648 Ligand-binding SRPBCC domain protein family no 0.48
    17 GFF5239 hypothetical protein no 0.47
    18 GFF6217 hypothetical protein no 0.47
    19 GFF6613 no description no 0.46
    20 GFF6572 Conjugative transfer protein TrbG no 0.46

    Or look for negative cofitness