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  • Top cofit genes for GFF4545 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6337 Ser/Thr protein phosphatase family protein no 0.53
    2 GFF5969 Transcriptional regulator, GntR family 0.27 0.53
    3 GFF4818 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.53
    4 GFF5228 Arachidonate 15-lipoxygenase precursor (EC 1.13.11.33) no 0.53
    5 GFF4074 Multicopper oxidase no 0.51
    6 GFF5439 FIG00932072: hypothetical protein no 0.51
    7 GFF6243 Ku domain protein no 0.51
    8 GFF3527 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase no 0.50
    9 GFF1091 Exopolyphosphatase (EC 3.6.1.11) no 0.50
    10 GFF1234 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) no 0.49
    11 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake no 0.49
    12 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.48
    13 GFF4181 hypothetical protein no 0.48
    14 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
    15 GFF5582 BUG/TctC family periplasmic protein no 0.48
    16 GFF2651 Cytochrome d ubiquinol oxidase subunit X (EC 1.10.3.-) no 0.47
    17 GFF2251 no description no 0.47
    18 GFF2992 BUG/TctC family periplasmic protein no 0.47
    19 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.47
    20 GFF3204 no description no 0.47

    Or look for negative cofitness