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  • Top cofit genes for GFF4540 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5174 Uncharacterized conserved protein no 0.52
    2 GFF2360 GGDEF domain protein no 0.49
    3 GFF5584 Cyclic-di-GMP-binding biofilm dispersal mediator protein no 0.46
    4 GFF2194 Tol-Pal system peptidoglycan-associated lipoprotein PAL no 0.45
    5 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.45
    6 GFF2050 hypothetical protein no 0.45
    7 GFF1975 hypothetical protein no 0.44
    8 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.43
    9 GFF148 Transcriptional regulator, LysR family no 0.42
    10 GFF6640 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) 0.54 0.42
    11 GFF4799 hypothetical protein no 0.42
    12 GFF6270 Uncharacterized MFS-type transporter no 0.42
    13 GFF4263 TonB-dependent siderophore receptor no 0.42
    14 GFF2559 hypothetical protein no 0.41
    15 GFF2402 hypothetical protein no 0.41
    16 GFF6738 Uncharacterized aldehyde oxidase, molybdopterin-binding subunit 0.44 0.41
    17 GFF6020 UPF0246 protein YaaA no 0.40
    18 GFF51 hypothetical protein no 0.40
    19 GFF6579 Conjugative transfer protein TrbB no 0.40
    20 GFF3834 hypothetical protein no 0.40

    Or look for negative cofitness