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  • Top cofit genes for PS417_23215 from Pseudomonas simiae WCS417

    RNA methyltransferase
    SEED: tRNA:Cm32/Um32 methyltransferase
    KEGG: tRNA/rRNA methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07070 membrane protein 0.30 0.35
    2 PS417_07090 histidine kinase 0.64 0.34
    3 PS417_07065 tripartite tricarboxylate transporter TctA 0.29 0.33
    4 PS417_07080 porin no 0.32
    5 PS417_07085 transcriptional regulator 0.50 0.31
    6 PS417_07075 tricarboxylic transport membrane protein 0.57 0.30
    7 PS417_23210 serine acetyltransferase 0.85 0.28
    8 PS417_05510 alpha/beta hydrolase no 0.27
    9 PS417_07635 transcription-repair coupling factor 0.53 0.27
    10 PS417_05165 cytosol aminopeptidase 0.88 0.26
    11 PS417_03005 arginine decarboxylase 0.73 0.22
    12 PS417_25965 acyl-CoA dehydrogenase no 0.22
    13 PS417_05540 histidine kinase 0.49 0.21
    14 PS417_24335 50S rRNA methyltransferase 0.51 0.21
    15 PS417_11705 cyclic peptide transporter 0.30 0.21
    16 PS417_16805 5,10-methylene tetrahydromethanopterin reductase no 0.20
    17 PS417_26985 phosphoenolpyruvate-protein phosphotransferase 0.54 0.19
    18 PS417_09220 cupin no 0.19
    19 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase no 0.19
    20 PS417_24500 DEAD/DEAH box helicase no 0.19

    Or look for negative cofitness