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  • Top cofit genes for GFF4533 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Transcriptional regulatory protein CitB, DpiA
    SEED: Transcriptional regulatory protein CitB, DpiA
    KEGG: two-component system, CitB family, response regulator CitB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4846 tRNA pseudouridine synthase C (EC 4.2.1.70) 0.26 0.84
    2 GFF4479 PTS system, mannose-specific IIC component (EC 2.7.1.69) no 0.80
    3 GFF2418 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3) no 0.79
    4 GFF82 hypothetical protein no 0.77
    5 GFF4036 tRNA-Ser-CGA no 0.76
    6 GFF1455 NrfC protein no 0.76
    7 GFF4526 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) no 0.76
    8 GFF4255 putative Cytochrome bd2, subunit II no 0.76
    9 GFF3208 Acetate kinase (EC 2.7.2.1) no 0.75
    10 GFF2569 Respiratory nitrate reductase beta chain (EC 1.7.99.4) no 0.74
    11 GFF2079 Ethanolamine utilization polyhedral-body-like protein EutN no 0.74
    12 GFF1240 Virulence genes transcriptional activator no 0.74
    13 GFF1255 Transposase no 0.74
    14 GFF1333 Serine transporter 0.24 0.73
    15 GFF2039 Putative cytochrome oxidase no 0.73
    16 GFF2687 Psp operon transcriptional activator 0.52 0.73
    17 GFF1145 PsiB protein 0.25 0.72
    18 GFF1237 FIG01046247: hypothetical protein no 0.72
    19 GFF2934 YrbA protein no 0.72
    20 GFF3958 Cobalt-precorrin-3b C17-methyltransferase no 0.72

    Or look for negative cofitness