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  • Top cofit genes for GFF4528 from Variovorax sp. SCN45

    Permease of the drug/metabolite transporter (DMT) superfamily
    SEED: Permease of the drug/metabolite transporter (DMT) superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6244 Predicted deacylase no 0.60
    2 GFF2334 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.60
    3 GFF5186 hypothetical protein no 0.60
    4 GFF4522 Uncharacterized MFS-type transporter no 0.56
    5 GFF1630 Esterase/lipase no 0.55
    6 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.55
    7 GFF313 FIG027190: Putative transmembrane protein no 0.54
    8 GFF5906 Nitrilase (EC 3.5.5.7) no 0.54
    9 GFF7284 Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) no 0.54
    10 GFF6434 Inner membrane protein YqiK no 0.53
    11 GFF4503 RNA polymerase sigma factor no 0.52
    12 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.51
    13 GFF5849 FIG01210206: hypothetical protein no 0.51
    14 GFF1598 no description no 0.51
    15 GFF6912 L-sorbosone dehydrogenase no 0.50
    16 GFF350 Ferric siderophore transport system, biopolymer transport protein ExbB no 0.50
    17 GFF515 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.49
    18 GFF5819 no description no 0.49
    19 GFF6619 hypothetical protein no 0.49
    20 GFF4253 hypothetical protein no 0.48

    Or look for negative cofitness