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  • Top cofit genes for PS417_23155 from Pseudomonas simiae WCS417

    pilus assembly protein PilW
    SEED: Type IV pilus biogenesis protein PilF
    KEGG: type IV pilus assembly protein PilF

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26525 DEAD/DEAH box helicase 0.45 0.57
    2 PS417_11900 conjugal transfer protein TraR 0.44 0.53
    3 PS417_27610 hypothetical protein no 0.53
    4 PS417_27605 hypothetical protein no 0.50
    5 PS417_18355 DNA-binding protein no 0.43
    6 PS417_01165 transcription accessory protein 0.33 0.43
    7 PS417_02495 GTPase HflX no 0.41
    8 PS417_27810 ribonuclease PH 0.44 0.41
    9 PS417_19055 ArsR family transcriptional regulator no 0.40
    10 PS417_23080 sugar ABC transporter ATPase no 0.37
    11 PS417_18365 hypothetical protein 0.25 0.36
    12 PS417_03050 hypothetical protein no 0.35
    13 PS417_23135 GTP-binding protein no 0.35
    14 PS417_11880 oxidoreductase no 0.34
    15 PS417_18350 hypothetical protein no 0.34
    16 PS417_11930 hypothetical protein 0.28 0.34
    17 PS417_24750 3-methyladenine DNA glycosylase no 0.33
    18 PS417_06370 cold-shock protein no 0.33
    19 PS417_00440 N-acetylmuramoyl-L-alanine amidase 0.71 0.32
    20 PS417_05590 iron ABC transporter ATP-binding protein no 0.31

    Or look for negative cofitness