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  • Top cofit genes for GFF4517 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter YtbD
    SEED: Putative drug efflux protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3125 no description no 0.63
    2 GFF3153 Two-component transcriptional response regulator, LuxR family no 0.60
    3 GFF6624 hypothetical protein no 0.60
    4 GFF5598 putative phospholipase D family protein no 0.58
    5 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.19 0.58
    6 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.58
    7 GFF1236 Methionine sulfoxide reductase molybdopterin-binding subunit 0.43 0.57
    8 GFF1268 FIG022199: FAD-binding protein no 0.57
    9 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.21 0.56
    10 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.56
    11 GFF2682 Protein containing domains DUF403 no 0.55
    12 GFF6026 no description no 0.54
    13 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.54
    14 GFF3605 Esterase/lipase no 0.54
    15 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.53
    16 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.70 0.53
    17 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.32 0.53
    18 GFF7295 HPr kinase/phosphorylase no 0.53
    19 GFF464 Transcriptional regulator, GntR family no 0.53
    20 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.53

    Or look for negative cofitness