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  • Top cofit genes for PS417_23090 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27055 hypothetical protein no 0.22
    2 PS417_22965 DNA mismatch repair protein MutT 0.64 0.21
    3 PS417_04820 poly(beta-D-mannuronate) C5 epimerase no 0.19
    4 PS417_07245 2-deoxy-D-ribonate 3-dehydrogenase (from data) no 0.17
    5 PS417_20175 LysR family transcriptional regulator no 0.17
    6 PS417_25235 ABC transporter substrate-binding protein 0.21 0.17
    7 PS417_24810 aldehyde dehydrogenase 0.15 0.17
    8 PS417_05980 chemotaxis protein CheA no 0.17
    9 PS417_22385 quinolinate synthase A 0.15 0.16
    10 PS417_00610 aminobenzoate oxygenase no 0.16
    11 PS417_06485 hypothetical protein no 0.16
    12 PS417_19130 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) no 0.16
    13 PS417_10515 acetyl-CoA acetyltransferase no 0.16
    14 PS417_24030 MFS transporter no 0.16
    15 PS417_15065 GntR family transcriptional regulator 0.43 0.16
    16 PS417_27995 type IV secretion protein Rhs no 0.16
    17 PS417_23115 carbon-nitrogen hydrolase 0.51 0.16
    18 PS417_11840 GntR family transcriptional regulator no 0.16
    19 PS417_02510 ATP phosphoribosyltransferase regulatory subunit 0.12 0.15
    20 PS417_01565 imidazole glycerol phosphate synthase no 0.15

    Or look for negative cofitness