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  • Top cofit genes for GFF4501 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4268 Uncharacterized MFS-type transporter no 0.49
    2 GFF7076 no description no 0.49
    3 GFF3442 RidA/YER057c/UK114 superfamily protein 0.34 0.46
    4 GFF6843 FIG00958542: hypothetical protein no 0.45
    5 GFF2630 Ligand-binding SRPBCC domain protein family no 0.44
    6 GFF2884 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.42
    7 GFF114 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.42
    8 GFF4906 hypothetical protein no 0.42
    9 GFF649 no description no 0.42
    10 GFF3063 mandelate racemase/muconate lactonizing enzyme family protein no 0.42
    11 GFF6711 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.41
    12 GFF1179 no description no 0.41
    13 GFF5243 General secretion pathway protein H no 0.40
    14 GFF6402 Imidazolonepropionase (EC 3.5.2.7) no 0.40
    15 GFF3060 Dihydrodipicolinate synthase family no 0.40
    16 GFF5434 FIG097052: Sugar transporter no 0.39
    17 GFF1317 no description no 0.39
    18 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) 0.53 0.39
    19 GFF7027 no description no 0.39
    20 GFF3460 Urea ABC transporter, ATPase protein UrtE no 0.38

    Or look for negative cofitness