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  • Top cofit genes for GFF4500 from Variovorax sp. SCN45

    FIG002283: Isochorismatase family protein
    SEED: FIG002283: Isochorismatase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF293 no description no 0.60
    2 GFF2385 no description no 0.54
    3 GFF1424 Phenylacetate ABC transporter, permease protein 2 no 0.52
    4 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.52
    5 GFF6385 Mll4878 protein no 0.51
    6 GFF771 Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141) no 0.51
    7 GFF3273 Translation initiation factor 2 no 0.50
    8 GFF2410 Intracellular protease 0.76 0.50
    9 GFF2681 Phosphoethanolamine transferase EptC [E.coli], specific for LPS heptose I residue no 0.50
    10 GFF3451 no description no 0.49
    11 GFF7288 Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) 0.37 0.49
    12 GFF2680 Protein of unknown function DUF1058 no 0.49
    13 GFF1178 hypothetical protein no 0.49
    14 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.26 0.49
    15 GFF6408 Urocanate hydratase (EC 4.2.1.49) 0.58 0.47
    16 GFF2881 Putative transmembrane protein no 0.47
    17 GFF1786 hypothetical protein no 0.46
    18 GFF6104 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) 0.28 0.46
    19 GFF5366 L-Proline/Glycine betaine transporter ProP 0.22 0.46
    20 GFF5735 Flagellar hook-associated protein FlgK no 0.46

    Or look for negative cofitness