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  • Top cofit genes for GFF4489 from Variovorax sp. SCN45

    23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191)
    SEED: LSU m5C1962 methyltransferase RlmI
    KEGG: ribosomal RNA large subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2796 Dihydrodipicolinate synthase family protein PP2639 no 0.51
    2 GFF2258 4-hydroxybenzoate transporter no 0.50
    3 GFF4890 hypothetical protein no 0.49
    4 GFF3303 Acetyltransferase, GNAT family no 0.49
    5 GFF6321 Ferrichrome-iron receptor no 0.49
    6 GFF691 hypothetical protein no 0.49
    7 GFF4331 Oxidoreductase, GMC family no 0.48
    8 GFF21 no description no 0.48
    9 GFF179 D-mannonate oxidoreductase (EC 1.1.1.57) no 0.48
    10 GFF1700 hypothetical protein no 0.47
    11 GFF509 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    12 GFF1327 Cell division protein BolA no 0.47
    13 GFF539 no description no 0.47
    14 GFF1273 no description no 0.47
    15 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.46
    16 GFF6653 Aminotransferase, class III no 0.46
    17 GFF3113 Methionine ABC transporter permease protein no 0.45
    18 GFF4177 Epoxyqueuosine reductase (EC 1.17.99.6) QueH no 0.45
    19 GFF4671 putative membrane protein no 0.44
    20 GFF3565 Acyl-CoA dehydrogenase no 0.44

    Or look for negative cofitness