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  • Top cofit genes for GFF4485 from Variovorax sp. SCN45

    FIG00715336: hypothetical protein
    SEED: FIG00715336: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2379 Serine/threonine protein kinase 1.00 1.00
    2 GFF2510 Type IV fimbrial assembly, ATPase PilB 0.99 0.97
    3 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.98 0.97
    4 GFF5322 Type IV pilus biogenesis protein PilP 0.99 0.97
    5 GFF5490 Uncharacterized protein with LysM domain, COG1652 1.00 0.97
    6 GFF5320 Type IV pilus biogenesis protein PilN 0.98 0.97
    7 GFF5323 Type IV pilus biogenesis protein PilQ 0.99 0.97
    8 GFF2151 twitching motility protein PilG 0.98 0.96
    9 GFF5419 Type IV pilus biogenesis protein PilE no 0.96
    10 GFF5321 Type IV pilus biogenesis protein PilO 0.99 0.96
    11 GFF5319 Type IV pilus biogenesis protein PilM 0.99 0.96
    12 GFF2509 Type IV fimbrial assembly protein PilC 0.99 0.96
    13 GFF5414 hypothetical protein no 0.96
    14 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.96
    15 GFF5417 hypothetical protein no 0.96
    16 GFF3826 Response regulator receiver:LytTr DNA-binding region 0.97 0.96
    17 GFF33 Type IV pilus biogenesis protein PilZ 0.98 0.96
    18 GFF993 Type IV pilus biogenesis protein PilF 0.94 0.95
    19 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.95
    20 GFF2154 twitching motility protein PilJ 0.97 0.95

    Or look for negative cofitness