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  • Top cofit genes for GFF4484 from Variovorax sp. SCN45

    ATP-dependent protease subunit HslV (EC 3.4.25.2)
    SEED: ATP-dependent protease HslV (EC 3.4.25.-)
    KEGG: ATP-dependent HslUV protease, peptidase subunit HslV

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1681 Methylisocitrate lyase (EC 4.1.3.30) no 0.58
    2 GFF1262 Rhodanese-related sulfurtransferase no 0.56
    3 GFF6253 Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1) no 0.55
    4 GFF5792 Mg2+ and Co2+ transporters 0.26 0.55
    5 GFF2475 no description 0.70 0.54
    6 GFF45 Phospholipase C (EC 3.1.4.3) no 0.54
    7 GFF1698 BUG/TctC family periplasmic protein no 0.53
    8 GFF6782 TRAP transporter solute receptor, TAXI family precursor no 0.53
    9 GFF5832 MoaF protein precursor no 0.52
    10 GFF3103 Cys-tRNA(Pro) deacylase YbaK no 0.52
    11 GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.51
    12 GFF2415 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) 0.38 0.50
    13 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.50
    14 GFF722 hypothetical protein no 0.50
    15 GFF4064 no description no 0.50
    16 GFF848 no description no 0.50
    17 GFF1813 Acetylornithine deacetylase-like protein Acry_1162 0.37 0.49
    18 GFF6834 no description no 0.49
    19 GFF5628 Transcriptional regulator Daci_1847, LysR family 0.30 0.49
    20 GFF6911 Transcriptional regulator, LacI family no 0.48

    Or look for negative cofitness