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  • Top cofit genes for GFF4483 from Variovorax sp. SCN45

    ATP-dependent hsl protease ATP-binding subunit HslU
    SEED: ATP-dependent hsl protease ATP-binding subunit HslU
    KEGG: ATP-dependent HslUV protease ATP-binding subunit HslU

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3788 putative secreted protein no 0.61
    2 GFF1040 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.57
    3 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.56
    4 GFF526 Tricarboxylate transport transcriptional regulator TctD no 0.55
    5 GFF7325 Glucans biosynthesis glucosyltransferase H 0.25 0.54
    6 GFF646 no description no 0.54
    7 GFF2010 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) 0.58 0.54
    8 GFF6573 Conjugative transfer protein TrbF no 0.53
    9 GFF5682 TRAP-type transport system, periplasmic component no 0.51
    10 GFF4135 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.51
    11 GFF1471 Uncharacterized MFS-type transporter no 0.51
    12 GFF2014 hypothetical protein no 0.50
    13 GFF1740 Transcriptional regulator, LysR family 0.20 0.49
    14 GFF4887 FIG00582580: hypothetical protein no 0.48
    15 GFF3258 hypothetical protein no 0.48
    16 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.48
    17 GFF30 Murein endolytic transglycosylase MltG 0.50 0.47
    18 GFF6750 hypothetical protein no 0.47
    19 GFF5757 hypothetical protein no 0.47
    20 GFF3366 Septum site-determining protein MinD 0.69 0.47

    Or look for negative cofitness