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  • Top cofit genes for PS417_22940 from Pseudomonas simiae WCS417

    MFS transporter
    SEED: Permeases of the major facilitator superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11995 RNA polymerase sigma factor no 0.20
    2 PS417_18970 hypothetical protein no 0.20
    3 PS417_17675 ABC transporter 0.18 0.19
    4 PS417_26115 glutamine ABC transporter ATP-binding protein no 0.19
    5 PS417_20450 hypothetical protein no 0.19
    6 PS417_05230 membrane protein no 0.18
    7 PS417_11640 GntR family transcriptional regulator no 0.18
    8 PS417_26385 amino acid ABC transporter substrate-binding protein no 0.18
    9 PS417_00790 curli production assembly protein CsgG 0.45 0.18
    10 PS417_07025 hypothetical protein no 0.17
    11 PS417_27210 AsnC family transcriptional regulator 0.28 0.17
    12 PS417_21260 hypothetical protein no 0.17
    13 PS417_24455 membrane protein 0.46 0.16
    14 PS417_15245 PTS sugar transporter subunit IIC no 0.16
    15 PS417_28140 asparaginase no 0.16
    16 PS417_23320 heme oxygenase no 0.16
    17 PS417_25370 hypothetical protein no 0.16
    18 PS417_15300 ATPase AAA no 0.16
    19 PS417_11625 fumarate hydratase no 0.16
    20 PS417_17765 iron ABC transporter permease no 0.16

    Or look for negative cofitness