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  • Top cofit genes for GFF4466 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Putative HTH-type transcriptional regulator ykgD
    SEED: Putative HTH-type transcriptional regulator ykgD

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3972 Putative acyl carrier protein no 0.61
    2 GFF460 hypothetical protein no 0.58
    3 GFF4219 glycerol dehyrdratase activator no 0.57
    4 GFF510 kinase (ribokinase family) no 0.56
    5 GFF3481 Nicotinamidase (EC 3.5.1.19) no 0.55
    6 GFF1627 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS no 0.55
    7 GFF4328 2-aminoethylphosphonate ABC transporter permease protein II (TC 3.A.1.9.1) no 0.54
    8 GFF1077 tRNA:Cm32/Um32 methyltransferase no 0.54
    9 GFF4261 Propionate catabolism operon regulatory protein PrpR no 0.52
    10 GFF983 Aspartate racemase (EC 5.1.1.13) no 0.52
    11 GFF3265 Pathogenicity island encoded protein: SPI3 no 0.52
    12 GFF4494 Ferric enterobactin uptake protein FepE no 0.51
    13 GFF2541 putative cytoplasmic protein no 0.51
    14 GFF4643 hypothetical protein no 0.51
    15 GFF3139 Sensory histidine kinase QseC no 0.51
    16 GFF2540 FIG01046001: hypothetical protein no 0.51
    17 GFF3462 FIG00638802: hypothetical protein no 0.51
    18 GFF4742 Type III secretion transcriptional activator HilA no 0.50
    19 GFF3099 Molybdenum-binding periplasmic protein no 0.49
    20 GFF3407 SifA protein no 0.48

    Or look for negative cofitness