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  • Top cofit genes for PS417_22855 from Pseudomonas simiae WCS417

    ssDNA exonuclease RecJ
    SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
    KEGG: single-stranded-DNA-specific exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase 0.68 0.44
    2 PS417_21575 chemotaxis protein 0.53 0.44
    3 PS417_19665 flagellar motor protein MotD 0.43 0.43
    4 PS417_19675 chemotaxis protein CheY 0.52 0.43
    5 PS417_19690 histidine kinase 0.53 0.42
    6 PS417_19860 flagellar hook protein FlgL no 0.41
    7 PS417_19650 chemotaxis protein CheW 0.53 0.41
    8 PS417_19795 flagellar assembly protein FliH 0.46 0.41
    9 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.41
    10 PS417_19660 cobalamin biosynthesis protein CobQ 0.27 0.41
    11 PS417_19840 flagellar cap protein FliD 0.33 0.40
    12 PS417_19885 flagellar basal body rod protein FlgG 0.57 0.40
    13 PS417_19825 ATPase AAA 0.53 0.40
    14 PS417_19805 flagellar M-ring protein FliF 0.45 0.39
    15 PS417_21565 flagellar basal body rod protein FlgC 0.67 0.39
    16 PS417_19870 flagellar rod assembly protein FlgJ no 0.39
    17 PS417_19865 flagellar hook protein FlgK 0.74 0.39
    18 PS417_21555 flagellar hook protein FlgE no 0.39
    19 PS417_19710 flagellar biosynthesis protein FlhA 0.44 0.39
    20 PS417_19740 flagellar biosynthesis protein flip 0.42 0.39

    Or look for negative cofitness