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Cofit
Protein
Homologs
Top cofit genes for GFF4465 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF633
Urea ABC transporter, ATPase protein UrtD
no
0.65
2
GFF1562
Transcriptional regulator, LysR family
no
0.60
3
GFF5818
Two-component transcriptional response regulator, NarL/FixJ family
no
0.59
4
GFF6083
hypothetical protein PA3071
no
0.56
5
GFF4135
Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme
no
0.55
6
GFF4537
Tetrapartite efflux system, inner membrane component FusBC-like
no
0.54
7
GFF1478
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
no
0.54
8
GFF3429
Transcriptional regulator, AraC family
no
0.54
9
GFF1485
Transcriptional regulator, AraC family
no
0.53
10
GFF3373
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)
no
0.53
11
GFF736
hypothetical protein
no
0.53
12
GFF6555
no description
no
0.53
13
GFF1
hypothetical protein
no
0.53
14
GFF4384
Plasmid replication initiator protein
no
0.52
15
GFF3557
hypothetical protein
no
0.52
16
GFF45
Phospholipase C (EC 3.1.4.3)
no
0.52
17
GFF1600
Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1)
no
0.52
18
GFF5217
Ferric iron ABC transporter, iron-binding protein
no
0.51
19
GFF5277
Sorbitol dehydrogenase (EC 1.1.1.14)
no
0.51
20
GFF830
ChlI component of cobalt chelatase involved in B12 biosynthesis
no
0.50
Or look for
negative cofitness