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  • Top cofit genes for GFF4465 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF633 Urea ABC transporter, ATPase protein UrtD no 0.65
    2 GFF1562 Transcriptional regulator, LysR family no 0.60
    3 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family no 0.59
    4 GFF6083 hypothetical protein PA3071 no 0.56
    5 GFF4135 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.55
    6 GFF4537 Tetrapartite efflux system, inner membrane component FusBC-like no 0.54
    7 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) no 0.54
    8 GFF3429 Transcriptional regulator, AraC family no 0.54
    9 GFF1485 Transcriptional regulator, AraC family no 0.53
    10 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) no 0.53
    11 GFF736 hypothetical protein no 0.53
    12 GFF6555 no description no 0.53
    13 GFF1 hypothetical protein no 0.53
    14 GFF4384 Plasmid replication initiator protein no 0.52
    15 GFF3557 hypothetical protein no 0.52
    16 GFF45 Phospholipase C (EC 3.1.4.3) no 0.52
    17 GFF1600 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.52
    18 GFF5217 Ferric iron ABC transporter, iron-binding protein no 0.51
    19 GFF5277 Sorbitol dehydrogenase (EC 1.1.1.14) no 0.51
    20 GFF830 ChlI component of cobalt chelatase involved in B12 biosynthesis no 0.50

    Or look for negative cofitness