Top cofit genes for GFF4461 from Hydrogenophaga sp. GW460-11-11-14-LB1

UPF0028 protein YchK

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF3148		IncF plasmid conjugative transfer pilus assembly protein TraK	no	0.49
2	GFF3781		3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	no	0.44
3	GFF484		Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)	no	0.42
4	GFF1939		Pirin	no	0.40
5	GFF3007		Polysaccharide deacetylase	no	0.39
6	GFF5750		Zinc ABC transporter, inner membrane permease protein ZnuB	no	0.39
7	GFF1932		Bll5738 protein	no	0.38
8	GFF2185		hypothetical protein	no	0.37
9	GFF3140		IncF plasmid conjugative transfer pilus assembly protein TraW	no	0.37
10	GFF1029		2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like	no	0.36
11	GFF4590		Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	no	0.36
12	GFF1717		UPF0225 protein YchJ	no	0.36
13	GFF5832		Dioxygenases related to 2-nitropropane dioxygenase	no	0.36
14	GFF472		hypothetical protein	no	0.36
15	GFF984		hypothetical protein	no	0.35
16	GFF3743		Aspartate dehydrogenase homolog	no	0.35
17	GFF2854		Probable hydrolase	no	0.35
18	GFF480		Geranyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.5)	no	0.35
19	GFF816		FIG015287: Zinc protease	no	0.34
20	GFF3639		Outer membrane protein A precursor	no	0.34

Or look for negative cofitness