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  • Top cofit genes for GFF4445 from Variovorax sp. SCN45

    UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-)
    SEED: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)
    KEGG: UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5334 Phospholipid ABC transporter ATP-binding protein MlaF 0.80 0.65
    2 GFF6928 Putative transmembrane protein no 0.65
    3 GFF5281 Xylulose kinase (EC 2.7.1.17) 0.68 0.64
    4 GFF5864 no description no 0.61
    5 GFF5266 Transaldolase (EC 2.2.1.2) 0.83 0.59
    6 GFF2640 PKHD-type hydroxylase YbiX no 0.59
    7 GFF3787 Biotin carboxylase (EC 6.3.4.14) no 0.58
    8 GFF1187 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) no 0.57
    9 GFF2239 no description no 0.56
    10 GFF1441 putative membrane protein no 0.55
    11 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.55
    12 GFF5221 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) 0.37 0.54
    13 GFF1188 Thiazole synthase (EC 2.8.1.10) 0.44 0.54
    14 GFF2567 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) 0.35 0.53
    15 GFF816 L-carnitine dehydratase/bile acid-inducible protein F 0.46 0.53
    16 GFF3518 no description no 0.53
    17 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.21 0.53
    18 GFF1820 FIG137887: membrane protein related to purine degradation 0.45 0.52
    19 GFF930 Transcriptional regulator, GntR family no 0.52
    20 GFF7009 hypothetical protein no 0.51

    Or look for negative cofitness