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  • Top cofit genes for PS417_22710 from Pseudomonas simiae WCS417

    TonB-dependent receptor
    SEED: TonB-dependent hemin , ferrichrome receptor
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25405 catalase no 0.54
    2 PS417_26500 thioesterase 0.68 0.52
    3 PS417_16370 chemotaxis protein CheY 0.68 0.51
    4 PS417_06365 RNA polymerase sigma factor 0.67 0.50
    5 PS417_10720 chemotaxis protein CheY 0.67 0.50
    6 PS417_28265 pyridoxamine kinase no 0.49
    7 PS417_11460 divalent metal cation transporter MntH no 0.48
    8 PS417_00665 RND transporter no 0.47
    9 PS417_00440 N-acetylmuramoyl-L-alanine amidase 0.41 0.47
    10 PS417_16160 ABC transporter substrate-binding protein 0.38 0.46
    11 PS417_03990 ligand-gated channel protein 0.76 0.46
    12 PS417_00655 DSBA oxidoreductase no 0.45
    13 PS417_27505 transcriptional regulator 0.55 0.45
    14 PS417_24885 transcriptional regulator no 0.44
    15 PS417_19560 amino acid ABC transporter substrate-binding protein 0.37 0.44
    16 PS417_27295 hypothetical protein no 0.44
    17 PS417_24595 histidine kinase 0.26 0.44
    18 PS417_15075 NAD-glutamate dehydrogenase no 0.44
    19 PS417_16070 TonB-dependent receptor no 0.43
    20 PS417_09620 lipopolysaccharide biosynthesis protein no 0.42

    Or look for negative cofitness