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  • Top cofit genes for PS417_22700 from Pseudomonas simiae WCS417

    RNA polymerase subunit sigma-24
    SEED: FIG006045: Sigma factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01355 membrane protein no 0.52
    2 PS417_25320 dTDP-4-dehydrorhamnose reductase no 0.43
    3 PS417_14480 glycogen synthase no 0.40
    4 PS417_05885 potassium transporter Kup no 0.38
    5 PS417_23830 hypothetical protein no 0.37
    6 PS417_22710 TonB-dependent receptor 0.18 0.35
    7 PS417_00245 oligopeptidase A 0.18 0.34
    8 PS417_22270 hypothetical protein 0.42 0.34
    9 PS417_04735 LysR family transcriptional regulator no 0.33
    10 PS417_22715 heme oxygenase no 0.33
    11 PS417_04495 LITAF-like zinc ribbon domain containing protein no 0.31
    12 PS417_27505 transcriptional regulator no 0.31
    13 PS417_12395 aminopeptidase N no 0.31
    14 PS417_18355 DNA-binding protein no 0.30
    15 PS417_15075 NAD-glutamate dehydrogenase 0.16 0.27
    16 PS417_04750 hypothetical protein no 0.27
    17 PS417_12015 phosphoglycerate mutase 0.59 0.26
    18 PS417_04740 RND transporter no 0.26
    19 PS417_25815 magnesium transporter ApaG no 0.25
    20 PS417_16980 exonuclease III no 0.25

    Or look for negative cofitness