Top cofit genes for GFF4432 from Variovorax sp. SCN45

Two-component system response regulator protein
SEED: Sigma-54 dependent transcriptional regulator
KEGG: two-component system, NtrC family, response regulator PilR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF993		Type IV pilus biogenesis protein PilF	0.93	0.99
2	GFF5418		Type IV fimbrial biogenesis protein PilY1	no	0.99
3	GFF5417		hypothetical protein	no	0.98
4	GFF5419		Type IV pilus biogenesis protein PilE	0.97	0.98
5	GFF2509		Type IV fimbrial assembly protein PilC	0.98	0.98
6	GFF5416		Type IV fimbrial biogenesis protein PilW	no	0.98
7	GFF5490		Uncharacterized protein with LysM domain, COG1652	0.98	0.98
8	GFF5319		Type IV pilus biogenesis protein PilM	0.99	0.98
9	GFF2510		Type IV fimbrial assembly, ATPase PilB	0.98	0.98
10	GFF5322		Type IV pilus biogenesis protein PilP	0.99	0.98
11	GFF5321		Type IV pilus biogenesis protein PilO	0.99	0.98
12	GFF5323		Type IV pilus biogenesis protein PilQ	0.98	0.98
13	GFF6075		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	0.98	0.98
14	GFF3826		Response regulator receiver:LytTr DNA-binding region	0.97	0.98
15	GFF2508		Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)	0.98	0.98
16	GFF3068		FIG00538108: hypothetical protein	0.98	0.98
17	GFF5320		Type IV pilus biogenesis protein PilN	0.98	0.97
18	GFF5414		hypothetical protein	no	0.97
19	GFF5415		Type IV fimbrial biogenesis protein PilV	0.97	0.97
20	GFF2519		FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)	0.98	0.97

Or look for negative cofitness