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  • Top cofit genes for GFF4429 from Variovorax sp. SCN45

    Inner membrane protein YpjD
    SEED: CcsA-related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4166 Cytidine deaminase (EC 3.5.4.5) no 0.69
    2 GFF3772 Arginase (EC 3.5.3.1) no 0.67
    3 GFF6990 hypothetical protein no 0.61
    4 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.60
    5 GFF3018 VgrG protein no 0.59
    6 GFF1874 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) no 0.58
    7 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) no 0.58
    8 GFF4329 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.57
    9 GFF1572 Transcriptional regulator, LysR family no 0.56
    10 GFF3156 FIG00441737: hypothetical protein no 0.55
    11 GFF5449 Probable lipoprotein YiaD no 0.55
    12 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.55
    13 GFF2594 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.54
    14 GFF6126 putative membrane protein no 0.54
    15 GFF189 Negative transcriptional regulator no 0.54
    16 GFF6197 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.54
    17 GFF2840 Integral membrane protein, interacts with FtsH no 0.53
    18 GFF3738 Uncharacterized protein YraP no 0.53
    19 GFF6706 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.52
    20 GFF2127 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.52

    Or look for negative cofitness