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  • Top cofit genes for PS417_22670 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_10885 Deoxyribose 1-dehydrogenase, beta subunit (from data) 0.36 0.45
    2 PS417_07265 2-deoxy-D-ribonate transporter 1 (from data) no 0.44
    3 PS417_07260 2-deoxy-D-ribonate transporter 2 (from data) no 0.44
    4 PS417_07255 Deoxyribonolactonase (from data) no 0.43
    5 PS417_21490 molybdopterin-guanine dinucleotide biosynthesis protein MobA 0.27 0.41
    6 PS417_10890 Deoxyribose 1-dehydrogenase, alpha subunit (from data) 0.34 0.40
    7 PS417_07250 2-deoxy-3-keto-D-ribonoate cleavage enzyme (from data) 0.44 0.39
    8 PS417_07240 Transcriptional regulator of deoxyribose catabolism (from data) no 0.36
    9 PS417_13970 glycerate kinase 0.60 0.35
    10 PS417_13975 CdaR family transcriptional regulator no 0.34
    11 PS417_07245 2-deoxy-D-ribonate 3-dehydrogenase (from data) no 0.30
    12 PS417_21395 radical SAM protein no 0.30
    13 PS417_13375 LysR family transcriptional regulator 0.32 0.29
    14 PS417_04180 GntR family transcriptional regulator no 0.27
    15 PS417_21495 lipoprotein 0.31 0.26
    16 PS417_10880 cytochrome c component of deoxyribose dehydrogenase (from data) 0.34 0.26
    17 PS417_27605 hypothetical protein no 0.25
    18 PS417_22385 quinolinate synthase A no 0.24
    19 PS417_03900 type II secretion system protein F no 0.24
    20 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.09 0.23

    Or look for negative cofitness