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  • Top cofit genes for GFF4423 from Variovorax sp. SCN45

    Conjugative transfer protein TrbI
    SEED: Conjugative transfer protein TrbI
    KEGG: type IV secretion system protein VirB10

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6160 Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family no 0.67
    2 GFF2084 Phosphatidate cytidylyltransferase (EC 2.7.7.41) no 0.60
    3 GFF5519 Transcriptional regulator no 0.58
    4 GFF3893 hypothetical protein no 0.55
    5 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component no 0.54
    6 GFF1148 hypothetical protein no 0.53
    7 GFF4381 putative lipoprotein no 0.53
    8 GFF4242 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.53
    9 GFF4401 no description no 0.52
    10 GFF6299 BUG/TctC family periplasmic protein no 0.51
    11 GFF5226 Probable cytochrome c2 no 0.51
    12 GFF5402 Transcriptional regulator, IclR family no 0.51
    13 GFF6647 Two-component transcriptional response regulator, LuxR family no 0.51
    14 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.51
    15 GFF4931 peptidase, family M14 no 0.51
    16 GFF6104 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.50
    17 GFF1771 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.50
    18 GFF2263 putative membrane protein no 0.50
    19 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) no 0.49
    20 GFF2547 Type I antifreeze protein no 0.48

    Or look for negative cofitness