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  • Top cofit genes for PS417_22640 from Pseudomonas simiae WCS417

    cytochrome C biogenesis protein CcmE
    SEED: C4-dicarboxylate transport sensor protein
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22650 MFS transporter 0.97 0.28
    2 PS417_28430 alpha-2-macroglobulin 0.17 0.26
    3 PS417_01805 amino acid ABC transporter substrate-binding protein no 0.21
    4 PS417_11175 AraC family transcriptional regulator no 0.20
    5 PS417_24155 ATP-binding protein no 0.20
    6 PS417_04485 hypothetical protein no 0.20
    7 PS417_08000 beta-hydroxylase no 0.20
    8 PS417_23850 ABC transporter permease no 0.19
    9 PS417_18100 iron ABC transporter no 0.19
    10 PS417_19195 hypothetical protein 0.24 0.18
    11 PS417_05120 RNA polymerase subunit sigma-24 no 0.18
    12 PS417_21895 nuclease PIN no 0.18
    13 PS417_03520 secretin no 0.18
    14 PS417_03875 membrane protein no 0.18
    15 PS417_18855 peptidase no 0.18
    16 PS417_03555 ATPase AAA no 0.18
    17 PS417_24945 LuxR family transcriptional regulator no 0.18
    18 PS417_05880 ribosomal protein S12 methylthiotransferase no 0.17
    19 PS417_06975 membrane protein 0.22 0.17
    20 PS417_01505 gamma-aminobutyrate transporter no 0.17

    Or look for negative cofitness