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  • Top cofit genes for GFF4418 from Variovorax sp. SCN45

    Conjugative transfer protein TrbJ
    SEED: Conjugative transfer protein TrbJ

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3650 FIG00932140: hypothetical protein no 0.62
    2 GFF338 Chloramphenicol acetyltransferase (EC 2.3.1.28) no 0.59
    3 GFF2683 Protein containing domains DUF404, DUF407 no 0.56
    4 GFF4042 Copper-sensing two-component system response regulator CusR no 0.56
    5 GFF1236 Methionine sulfoxide reductase molybdopterin-binding subunit no 0.56
    6 GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) no 0.54
    7 GFF4410 Transcriptional regulator, LysR family no 0.53
    8 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.52
    9 GFF7322 hypothetical protein no 0.52
    10 GFF3093 FIG138056: a glutathione-dependent thiol reductase no 0.52
    11 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.51
    12 GFF6905 Chloride channel protein no 0.51
    13 GFF2502 O-antigen acetylase no 0.51
    14 GFF6635 FIG00441227: hypothetical protein no 0.50
    15 GFF3322 hypothetical protein no 0.50
    16 GFF2165 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit no 0.50
    17 GFF5529 Putative outer membrane protein no 0.50
    18 GFF3819 hypothetical protein no 0.50
    19 GFF5409 FIG00576366: hypothetical protein no 0.50
    20 GFF6758 Lactoylglutathione lyase (EC 4.4.1.5) no 0.50

    Or look for negative cofitness