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  • Top cofit genes for GFF4417 from Variovorax sp. SCN45

    Conjugative transfer protein TrbE
    SEED: Conjugative transfer protein TrbE
    KEGG: type IV secretion system protein VirB4

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2817 Probable proline-rich protein no 0.59
    2 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like no 0.56
    3 GFF250 Homoserine/homoserine lactone efflux protein no 0.53
    4 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) no 0.52
    5 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake no 0.52
    6 GFF6598 Putative formate dehydrogenase oxidoreductase protein no 0.52
    7 GFF4444 Predicted nucleotidyltransferase no 0.52
    8 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.51
    9 GFF6391 RfbJ protein no 0.50
    10 GFF7265 hypothetical protein, not 6-phosphogluconolactonase no 0.50
    11 GFF5639 Death on curing protein, Doc toxin no 0.50
    12 GFF2360 GGDEF domain protein no 0.50
    13 GFF2864 no description no 0.49
    14 GFF6086 Putative short-chain dehydrogenase no 0.49
    15 GFF6420 carboxyl-terminal protease no 0.48
    16 GFF3106 Hydrolase, alpha/beta fold family no 0.48
    17 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) no 0.48
    18 GFF4552 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) no 0.48
    19 GFF2438 Ferrichrome-iron receptor no 0.48
    20 GFF6719 hypothetical protein no 0.48

    Or look for negative cofitness