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  • Top cofit genes for GFF4416 from Sphingobium sp. HT1-2

    Transcriptional regulator, ArsR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3897 Isochorismate pyruvate-lyase (EC 4.2.99.21) no 0.78
    2 GFF1108 Transposase no 0.77
    3 GFF3047 Two-component oxygen-sensor histidine kinase FixL no 0.76
    4 GFF1041 TonB-dependent receptor no 0.76
    5 GFF906 TonB-dependent receptor no 0.76
    6 GFF957 Transcriptional regulator, LysR family no 0.75
    7 GFF1985 Transcriptional regulator, ArsR family no 0.74
    8 GFF3031 Copper resistance protein B no 0.73
    9 GFF1085 Phage integrase 0.47 0.71
    10 GFF1249 Capsular polysaccharide biosynthesis protein no 0.70
    11 GFF172 Glutathione S-transferase (EC 2.5.1.18) no 0.70
    12 GFF3383 protein of unknown function LppY and LpqO no 0.69
    13 GFF3758 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) no 0.69
    14 GFF2905 Cysteine synthase (EC 2.5.1.47) no 0.68
    15 GFF5214 hypothetical protein no 0.68
    16 GFF1060 'NADH pyrophosphatase (EC 3.6.1.22), decaps 5'-NAD modified RNA' transl_table=11 no 0.67
    17 GFF5167 hypothetical protein no 0.67
    18 GFF5186 Heavy metal resistance transcriptional regulator HmrR no 0.66
    19 GFF2961 Phage protein no 0.65
    20 GFF2176 hypothetical protein no 0.65

    Or look for negative cofitness