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Cofit
Protein
Homologs
Top cofit genes for GFF4411 from
Variovorax sp. SCN45
Conjugative transfer protein TrbK
SEED: probable lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5148
Taurine ABC transporter, substrate-binding protein TauA
no
0.52
2
GFF3667
Uncharacterized MFS-type transporter
no
0.50
3
GFF2865
Uncharacterized MFS-type transporter
no
0.49
4
GFF6345
Cytochrome c2
no
0.49
5
GFF4928
hypothetical protein
no
0.48
6
GFF7124
Mobile element protein
no
0.48
7
GFF6347
AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination
no
0.48
8
GFF7185
no description
no
0.48
9
GFF5862
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.47
10
GFF6837
BUG/TctC family periplasmic protein
no
0.47
11
GFF1318
hypothetical protein
no
0.47
12
GFF2723
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
no
0.46
13
GFF6318
Uncharacterized MFS-type transporter
no
0.46
14
GFF4089
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
no
0.46
15
GFF419
hypothetical protein
no
0.46
16
GFF4867
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.46
17
GFF99
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.45
18
GFF6937
Membrane protein
no
0.45
19
GFF5920
no description
no
0.45
20
GFF5235
General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD)
no
0.45
Or look for
negative cofitness