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Cofit
Protein
Homologs
Top cofit genes for GFF4404 from
Variovorax sp. SCN45
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6115
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.62
2
GFF6964
Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1)
no
0.61
3
GFF4117
Translation elongation factor Tu
no
0.60
4
GFF5469
Hydroxymethylpyrimidine ABC transporter, transmembrane component
no
0.60
5
GFF6169
Na(+) H(+) antiporter subunit F
no
0.58
6
GFF4136
hypothetical protein
no
0.57
7
GFF5326
Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1)
0.11
0.55
8
GFF6208
Cytosine/purine/uracil/thiamine/allantoin permease family protein
no
0.53
9
GFF6766
MATE efflux family protein
no
0.53
10
GFF3407
MaoC domain protein
no
0.53
11
GFF5980
Cyanate hydratase (EC 4.2.1.104)
no
0.53
12
GFF876
hypothetical protein
no
0.52
13
GFF65
hypothetical protein
no
0.52
14
GFF3758
NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
no
0.51
15
GFF5516
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
no
0.51
16
GFF2504
Cell division protein ZapD
no
0.51
17
GFF2666
Membrane-bound lytic murein transglycosylase B
no
0.51
18
GFF3807
FIG00538552: hypothetical protein
no
0.51
19
GFF4401
no description
no
0.51
20
GFF2533
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
0.36
0.50
Or look for
negative cofitness