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  • Top cofit genes for GFF4404 from Variovorax sp. SCN45

    Mobile element protein
    SEED: Mobile element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6115 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.62
    2 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) no 0.61
    3 GFF4117 Translation elongation factor Tu no 0.60
    4 GFF5469 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.60
    5 GFF6169 Na(+) H(+) antiporter subunit F no 0.58
    6 GFF4136 hypothetical protein no 0.57
    7 GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) 0.11 0.55
    8 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.53
    9 GFF6766 MATE efflux family protein no 0.53
    10 GFF3407 MaoC domain protein no 0.53
    11 GFF5980 Cyanate hydratase (EC 4.2.1.104) no 0.53
    12 GFF876 hypothetical protein no 0.52
    13 GFF65 hypothetical protein no 0.52
    14 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.51
    15 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.51
    16 GFF2504 Cell division protein ZapD no 0.51
    17 GFF2666 Membrane-bound lytic murein transglycosylase B no 0.51
    18 GFF3807 FIG00538552: hypothetical protein no 0.51
    19 GFF4401 no description no 0.51
    20 GFF2533 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.36 0.50

    Or look for negative cofitness