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Cofit
Protein
Homologs
Top cofit genes for GFF44 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1400
putative 2-pyrone-4,6-dicarboxylic acid hydrolase
no
0.55
2
GFF3702
Beta-propeller domains of methanol dehydrogenase type
no
0.53
3
GFF5440
RNA polymerase ECF-type sigma factor
no
0.52
4
GFF6431
hypothetical protein
no
0.52
5
GFF3978
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.51
6
GFF2474
Two-component transcriptional response regulator SMc02366, LuxR family
no
0.49
7
GFF4788
Uncharacterized protein COG3236
no
0.49
8
GFF483
Fumarate hydratase class I, aerobic (EC 4.2.1.2)
no
0.48
9
GFF519
Transcriptional regulator, AcrR family
no
0.48
10
GFF5010
Geranyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.5)
no
0.48
11
GFF4862
Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
no
0.47
12
GFF598
no description
no
0.47
13
GFF1305
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.46
14
GFF830
ChlI component of cobalt chelatase involved in B12 biosynthesis
no
0.46
15
GFF6767
no description
no
0.46
16
GFF6008
Citrate synthase (si) (EC 2.3.3.1)
no
0.46
17
GFF6309
Secreted and surface protein containing fasciclin-like repeats
no
0.46
18
GFF65
hypothetical protein
no
0.46
19
GFF7163
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)
no
0.45
20
GFF670
putative amidase Psyr_2260
no
0.45
Or look for
negative cofitness