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Cofit
Protein
Homologs
Top cofit genes for GFF4396 from
Variovorax sp. SCN45
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6424
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)
no
0.77
2
GFF4406
Alkane-1 monooxygenase (EC 1.14.15.3)
no
0.74
3
GFF1007
Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22)
no
0.72
4
GFF6294
Cell division protein
no
0.71
5
GFF7323
Transcriptional response regulatory protein GlrR
no
0.71
6
GFF239
DNA polymerase III chi subunit (EC 2.7.7.7)
no
0.70
7
GFF4801
DedA protein
no
0.68
8
GFF4993
putative tetratricopeptide repeat family protein
no
0.68
9
GFF375
hypothetical protein
no
0.68
10
GFF2836
MotA/TolQ/ExbB proton channel family protein
no
0.68
11
GFF3758
NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
no
0.68
12
GFF6392
hypothetical protein
no
0.68
13
GFF5455
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
no
0.67
14
GFF3875
beta-N-acetylglucosaminidase (EC 3.2.1.52)
no
0.67
15
GFF6036
DNA translocase FtsK
no
0.66
16
GFF1119
Ribonuclease HI (EC 3.1.26.4)
no
0.66
17
GFF312
FIG021862: membrane protein, exporter
no
0.65
18
GFF4397
hypothetical protein
no
0.64
19
GFF7371
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
0.37
0.64
20
GFF7375
Arginine:pyruvate transaminase
no
0.64
Or look for
negative cofitness