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  • Top cofit genes for GFF4396 from Variovorax sp. SCN45

    Mobile element protein
    SEED: Mobile element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.77
    2 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.74
    3 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) no 0.72
    4 GFF6294 Cell division protein no 0.71
    5 GFF7323 Transcriptional response regulatory protein GlrR no 0.71
    6 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.70
    7 GFF4801 DedA protein no 0.68
    8 GFF4993 putative tetratricopeptide repeat family protein no 0.68
    9 GFF375 hypothetical protein no 0.68
    10 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.68
    11 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.68
    12 GFF6392 hypothetical protein no 0.68
    13 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.67
    14 GFF3875 beta-N-acetylglucosaminidase (EC 3.2.1.52) no 0.67
    15 GFF6036 DNA translocase FtsK no 0.66
    16 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.66
    17 GFF312 FIG021862: membrane protein, exporter no 0.65
    18 GFF4397 hypothetical protein no 0.64
    19 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.37 0.64
    20 GFF7375 Arginine:pyruvate transaminase no 0.64

    Or look for negative cofitness